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Uses of Package
org.biomage.BioAssayData

Classes in org.biomage.BioAssayData used by org.biomage.BioAssayData
BioAssayData
          Represents the dataset created when the BioAssays are created.
BioAssayData_package.BioAssayData_list
          Inner list class for holding multiple entries for attribute bioAssayData_list.
BioAssayData_package.BioAssayDimension_list
          Inner list class for holding multiple entries for attribute bioAssayDimension_list.
BioAssayData_package.BioAssayMap_list
          Inner list class for holding multiple entries for attribute bioAssayMap_list.
BioAssayData_package.CompositeSequenceDimension_list
          Inner list class for holding multiple entries for attribute compositeSequenceDimension_list.
BioAssayData_package.DerivedBioAssayData_list
          Inner list class for holding multiple entries for attribute derivedBioAssayData_list.
BioAssayData_package.DesignElementDimension_list
          Inner list class for holding multiple entries for attribute designElementDimension_list.
BioAssayData_package.DesignElementMap_list
          Inner list class for holding multiple entries for attribute designElementMap_list.
BioAssayData_package.FeatureDimension_list
          Inner list class for holding multiple entries for attribute featureDimension_list.
BioAssayData_package.MeasuredBioAssayData_list
          Inner list class for holding multiple entries for attribute measuredBioAssayData_list.
BioAssayData_package.QuantitationTypeDimension_list
          Inner list class for holding multiple entries for attribute quantitationTypeDimension_list.
BioAssayData_package.QuantitationTypeMap_list
          Inner list class for holding multiple entries for attribute quantitationTypeMap_list.
BioAssayData_package.ReporterDimension_list
          Inner list class for holding multiple entries for attribute reporterDimension_list.
BioAssayDatum
          A single cell of the quantitation, bioAssay, designElement matrix.
BioAssayDimension
          An ordered list of bioAssays.
BioAssayMap
          The BioAssayMap is the description of how source MeasuredBioAssays and/or DerivedBioAssays are manipulated (mathematically) to produce DerivedBioAssays.
BioAssayMapping
          Container of the mappings of the input BioAssay dimensions to the output BioAssay dimension.
BioDataValues
          The actual values for the BioAssayCube.
CompositeSequenceDimension
          Specialized DesignElementDimension to hold CompositeSequences.
DerivedBioAssayData
          The output of a transformation event.
DesignElementDimension
          An ordered list of designElements.
DesignElementMap
          A DesignElementMap is the description of how source DesignElements are transformed into a target DesignElement.
DesignElementMapping
          Container of the mappings of the input DesignElement dimensions to the output DesignElement dimension.
FeatureDimension
          Specialized DesignElementDimension to hold Features.
MeasuredBioAssayData
          The data associated with the MeasuredBioAssay produced by FeatureExtraction.
QuantitationTypeDimension
          An ordered list of quantitationTypes.
QuantitationTypeMap
          A QuantitationTypeMap is the description of how source QuantitationTypes are mathematically transformed into a target QuantitationType.
QuantitationTypeMapping
          Container of the mappings of the input QuantitationType dimensions to the output QuantitationType dimension.
ReporterDimension
          Specialized DesignElementDimension to hold Reporters.
Transformation
          The process by which derivedBioAssays are created from measuredBioAssays and/or derivedBioAssays.