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A B C G I L M O Q R S T W

A

action - Variable in class org.biomage.BioMaterial.Treatment
The event that occurred (e.g.
actionMeasurement - Variable in class org.biomage.BioMaterial.Treatment
Measures events like duration, centrifuge speed, etc.
addToBioMaterial_list(BioMaterial) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add BioMaterial to BioMaterial_list
addToBioMaterial_list(int, BioMaterial) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add BioMaterial at position to BioMaterial_list
addToBioSample_list(BioSample) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add BioSample to BioSample_list
addToBioSample_list(int, BioSample) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add BioSample at position to BioSample_list
addToBioSource_list(BioSource) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add BioSource to BioSource_list
addToBioSource_list(int, BioSource) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add BioSource at position to BioSource_list
addToCharacteristics(OntologyEntry) - Method in class org.biomage.BioMaterial.BioMaterial
Method to add OntologyEntry to Characteristics_list
addToCharacteristics(int, OntologyEntry) - Method in class org.biomage.BioMaterial.BioMaterial
Method to add OntologyEntry at position to Characteristics_list
addToComponentCompounds(CompoundMeasurement) - Method in class org.biomage.BioMaterial.Compound
Method to add CompoundMeasurement to ComponentCompounds_list
addToComponentCompounds(int, CompoundMeasurement) - Method in class org.biomage.BioMaterial.Compound
Method to add CompoundMeasurement at position to ComponentCompounds_list
addToCompoundMeasurements(CompoundMeasurement) - Method in class org.biomage.BioMaterial.Treatment
Method to add CompoundMeasurement to CompoundMeasurements_list
addToCompoundMeasurements(int, CompoundMeasurement) - Method in class org.biomage.BioMaterial.Treatment
Method to add CompoundMeasurement at position to CompoundMeasurements_list
addToCompound_list(Compound) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add Compound to Compound_list
addToCompound_list(int, Compound) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add Compound at position to Compound_list
addToLabeledExtract_list(LabeledExtract) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add LabeledExtract to LabeledExtract_list
addToLabeledExtract_list(int, LabeledExtract) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to add LabeledExtract at position to LabeledExtract_list
addToLabels(Compound) - Method in class org.biomage.BioMaterial.LabeledExtract
Method to add Compound to Labels_list
addToLabels(int, Compound) - Method in class org.biomage.BioMaterial.LabeledExtract
Method to add Compound at position to Labels_list
addToQualityControlStatistics(NameValueType) - Method in class org.biomage.BioMaterial.BioMaterial
Method to add NameValueType to QualityControlStatistics_list
addToQualityControlStatistics(int, NameValueType) - Method in class org.biomage.BioMaterial.BioMaterial
Method to add NameValueType at position to QualityControlStatistics_list
addToSourceBioMaterialMeasurements(BioMaterialMeasurement) - Method in class org.biomage.BioMaterial.Treatment
Method to add BioMaterialMeasurement to SourceBioMaterialMeasurements_list
addToSourceBioMaterialMeasurements(int, BioMaterialMeasurement) - Method in class org.biomage.BioMaterial.Treatment
Method to add BioMaterialMeasurement at position to SourceBioMaterialMeasurements_list
addToTreatments(Treatment) - Method in class org.biomage.BioMaterial.BioMaterial
Method to add Treatment to Treatments_list
addToTreatments(int, Treatment) - Method in class org.biomage.BioMaterial.BioMaterial
Method to add Treatment at position to Treatments_list

B

BioMaterial - class org.biomage.BioMaterial.BioMaterial.
BioMaterial is an abstract class that represents the important substances such as cells, tissues, DNA, proteins, etc...
BioMaterial() - Constructor for class org.biomage.BioMaterial.BioMaterial
Default constructor.
BioMaterial(Attributes) - Constructor for class org.biomage.BioMaterial.BioMaterial
Attribute constructor.
BioMaterialMeasurement - class org.biomage.BioMaterial.BioMaterialMeasurement.
A BioMaterialMeasurement is a pairing of a source BioMaterial and an amount (Measurement) of that BioMaterial.
BioMaterialMeasurement() - Constructor for class org.biomage.BioMaterial.BioMaterialMeasurement
Default constructor.
BioMaterialMeasurement(Attributes) - Constructor for class org.biomage.BioMaterial.BioMaterialMeasurement
Attribute constructor.
BioMaterial_package - class org.biomage.BioMaterial.BioMaterial_package.
The classes in this package describe how a BioSource is treated to obtain the BioMaterial (typically a LabeledExtract) that is used by a BioAssayCreation in combination with an Array to produce a PhysicalBioAssay.
BioMaterial_package() - Constructor for class org.biomage.BioMaterial.BioMaterial_package
Default constructor.
BioMaterial_package(Attributes) - Constructor for class org.biomage.BioMaterial.BioMaterial_package
Attribute constructor.
BioMaterial_package.BioMaterial_list - class org.biomage.BioMaterial.BioMaterial_package.BioMaterial_list.
Inner list class for holding multiple entries for attribute bioMaterial_list.
BioMaterial_package.BioMaterial_list() - Constructor for class org.biomage.BioMaterial.BioMaterial_package.BioMaterial_list
 
BioMaterial_package.BioSample_list - class org.biomage.BioMaterial.BioMaterial_package.BioSample_list.
Inner list class for holding multiple entries for attribute bioSample_list.
BioMaterial_package.BioSample_list() - Constructor for class org.biomage.BioMaterial.BioMaterial_package.BioSample_list
 
BioMaterial_package.BioSource_list - class org.biomage.BioMaterial.BioMaterial_package.BioSource_list.
Inner list class for holding multiple entries for attribute bioSource_list.
BioMaterial_package.BioSource_list() - Constructor for class org.biomage.BioMaterial.BioMaterial_package.BioSource_list
 
BioMaterial_package.Compound_list - class org.biomage.BioMaterial.BioMaterial_package.Compound_list.
Inner list class for holding multiple entries for attribute compound_list.
BioMaterial_package.Compound_list() - Constructor for class org.biomage.BioMaterial.BioMaterial_package.Compound_list
 
BioMaterial_package.LabeledExtract_list - class org.biomage.BioMaterial.BioMaterial_package.LabeledExtract_list.
Inner list class for holding multiple entries for attribute labeledExtract_list.
BioMaterial_package.LabeledExtract_list() - Constructor for class org.biomage.BioMaterial.BioMaterial_package.LabeledExtract_list
 
BioSample - class org.biomage.BioMaterial.BioSample.
BioSamples are products of treatments that are of interest.
BioSample() - Constructor for class org.biomage.BioMaterial.BioSample
Default constructor.
BioSample(Attributes) - Constructor for class org.biomage.BioMaterial.BioSample
Attribute constructor.
BioSource - class org.biomage.BioMaterial.BioSource.
The BioSource is the original source material before any treatment events.
BioSource() - Constructor for class org.biomage.BioMaterial.BioSource
Default constructor.
BioSource(Attributes) - Constructor for class org.biomage.BioMaterial.BioSource
Attribute constructor.
bioMaterial - Variable in class org.biomage.BioMaterial.BioMaterialMeasurement
A source BioMaterial for a treatment.
bioMaterial_list - Variable in class org.biomage.BioMaterial.BioMaterial_package
BioMaterial is an abstract class that represents the important substances such as cells, tissues, DNA, proteins, etc...
bioSample_list - Variable in class org.biomage.BioMaterial.BioMaterial_package
BioSamples are products of treatments that are of interest.
bioSource_list - Variable in class org.biomage.BioMaterial.BioMaterial_package
The BioSource is the original source material before any treatment events.

C

Compound - class org.biomage.BioMaterial.Compound.
A Compound can be a simple compound such as SDS (sodium dodecyl sulfate).
Compound() - Constructor for class org.biomage.BioMaterial.Compound
Default constructor.
Compound(Attributes) - Constructor for class org.biomage.BioMaterial.Compound
Attribute constructor.
CompoundMeasurement - class org.biomage.BioMaterial.CompoundMeasurement.
A CompoundMeasurement is a pairing of a source Compound and an amount (Measurement) of that Compound.
CompoundMeasurement() - Constructor for class org.biomage.BioMaterial.CompoundMeasurement
Default constructor.
CompoundMeasurement(Attributes) - Constructor for class org.biomage.BioMaterial.CompoundMeasurement
Attribute constructor.
characteristics - Variable in class org.biomage.BioMaterial.BioMaterial
Innate properties of the biosource, such as genotype, cultivar, tissue type, cell type, ploidy, etc.
componentCompounds - Variable in class org.biomage.BioMaterial.Compound
The Compounds and their amounts used to create this Compound.
compound - Variable in class org.biomage.BioMaterial.CompoundMeasurement
A Compound to be used to create another Compound.
compoundMeasurements - Variable in class org.biomage.BioMaterial.Treatment
The compounds and their amounts used in the treatment.
compound_list - Variable in class org.biomage.BioMaterial.BioMaterial_package
A Compound can be a simple compound such as SDS (sodium dodecyl sulfate).

G

getAction() - Method in class org.biomage.BioMaterial.Treatment
Get method for action
getActionMeasurement() - Method in class org.biomage.BioMaterial.Treatment
Get method for actionMeasurement
getBioMaterial() - Method in class org.biomage.BioMaterial.BioMaterialMeasurement
Get method for bioMaterial
getBioMaterial_list() - Method in class org.biomage.BioMaterial.BioMaterial_package
Get method for bioMaterial_list
getBioSample_list() - Method in class org.biomage.BioMaterial.BioMaterial_package
Get method for bioSample_list
getBioSource_list() - Method in class org.biomage.BioMaterial.BioMaterial_package
Get method for bioSource_list
getCharacteristics() - Method in class org.biomage.BioMaterial.BioMaterial
Get method for characteristics
getComponentCompounds() - Method in class org.biomage.BioMaterial.Compound
Get method for componentCompounds
getCompound() - Method in class org.biomage.BioMaterial.CompoundMeasurement
Get method for compound
getCompoundMeasurements() - Method in class org.biomage.BioMaterial.Treatment
Get method for compoundMeasurements
getCompound_list() - Method in class org.biomage.BioMaterial.BioMaterial_package
Get method for compound_list
getFromBioMaterial_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to get BioMaterial from BioMaterial_list
getFromBioSample_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to get BioSample from BioSample_list
getFromBioSource_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to get BioSource from BioSource_list
getFromCharacteristics(int) - Method in class org.biomage.BioMaterial.BioMaterial
Method to get OntologyEntry from Characteristics_list
getFromComponentCompounds(int) - Method in class org.biomage.BioMaterial.Compound
Method to get CompoundMeasurement from ComponentCompounds_list
getFromCompoundMeasurements(int) - Method in class org.biomage.BioMaterial.Treatment
Method to get CompoundMeasurement from CompoundMeasurements_list
getFromCompound_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to get Compound from Compound_list
getFromLabeledExtract_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to get LabeledExtract from LabeledExtract_list
getFromLabels(int) - Method in class org.biomage.BioMaterial.LabeledExtract
Method to get Compound from Labels_list
getFromQualityControlStatistics(int) - Method in class org.biomage.BioMaterial.BioMaterial
Method to get NameValueType from QualityControlStatistics_list
getFromSourceBioMaterialMeasurements(int) - Method in class org.biomage.BioMaterial.Treatment
Method to get BioMaterialMeasurement from SourceBioMaterialMeasurements_list
getFromTreatments(int) - Method in class org.biomage.BioMaterial.BioMaterial
Method to get Treatment from Treatments_list
getIsSolvent() - Method in class org.biomage.BioMaterial.Compound
Get method for isSolvent
getLabeledExtract_list() - Method in class org.biomage.BioMaterial.BioMaterial_package
Get method for labeledExtract_list
getLabels() - Method in class org.biomage.BioMaterial.LabeledExtract
Get method for labels
getMaterialType() - Method in class org.biomage.BioMaterial.BioMaterial
Get method for materialType
getMeasurement() - Method in class org.biomage.BioMaterial.BioMaterialMeasurement
Get method for measurement
getMeasurement() - Method in class org.biomage.BioMaterial.CompoundMeasurement
Get method for measurement
getMerckIndex() - Method in class org.biomage.BioMaterial.Compound
Get method for merckIndex
getOrder() - Method in class org.biomage.BioMaterial.Treatment
Get method for order
getQualityControlStatistics() - Method in class org.biomage.BioMaterial.BioMaterial
Get method for qualityControlStatistics
getSourceBioMaterialMeasurements() - Method in class org.biomage.BioMaterial.Treatment
Get method for sourceBioMaterialMeasurements
getSourceContact() - Method in class org.biomage.BioMaterial.BioSource
Get method for sourceContact
getTreatments() - Method in class org.biomage.BioMaterial.BioMaterial
Get method for treatments
getType() - Method in class org.biomage.BioMaterial.BioSample
Get method for type

I

isSolvent - Variable in class org.biomage.BioMaterial.Compound
A Compound may be a special case Solvent.

L

LabeledExtract - class org.biomage.BioMaterial.LabeledExtract.
LabeledExtracts are special BioSamples that have Compounds which are detectable (these are often fluorescent or reactive moieties).
LabeledExtract() - Constructor for class org.biomage.BioMaterial.LabeledExtract
Default constructor.
LabeledExtract(Attributes) - Constructor for class org.biomage.BioMaterial.LabeledExtract
Attribute constructor.
labeledExtract_list - Variable in class org.biomage.BioMaterial.BioMaterial_package
LabeledExtracts are special BioSamples that have Compounds which are detectable (these are often fluorescent or reactive moieties).
labels - Variable in class org.biomage.BioMaterial.LabeledExtract
Compound used to label the extract.

M

materialType - Variable in class org.biomage.BioMaterial.BioMaterial
The type of material used, i.e.
measurement - Variable in class org.biomage.BioMaterial.BioMaterialMeasurement
The amount of the BioMaterial.
measurement - Variable in class org.biomage.BioMaterial.CompoundMeasurement
The amount of the Compound.
merckIndex - Variable in class org.biomage.BioMaterial.Compound
The Merck Index of this Compound.

O

order - Variable in class org.biomage.BioMaterial.Treatment
The chronological order in which a treatment occurred (in relation to other treatments).
org.biomage.BioMaterial - package org.biomage.BioMaterial
 

Q

qualityControlStatistics - Variable in class org.biomage.BioMaterial.BioMaterial
Measures of the quality of the BioMaterial.

R

removeElementAtFromBioMaterial_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove by position from BioMaterial_list
removeElementAtFromBioSample_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove by position from BioSample_list
removeElementAtFromBioSource_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove by position from BioSource_list
removeElementAtFromCharacteristics(int) - Method in class org.biomage.BioMaterial.BioMaterial
Method to remove by position from Characteristics_list
removeElementAtFromComponentCompounds(int) - Method in class org.biomage.BioMaterial.Compound
Method to remove by position from ComponentCompounds_list
removeElementAtFromCompoundMeasurements(int) - Method in class org.biomage.BioMaterial.Treatment
Method to remove by position from CompoundMeasurements_list
removeElementAtFromCompound_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove by position from Compound_list
removeElementAtFromLabeledExtract_list(int) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove by position from LabeledExtract_list
removeElementAtFromLabels(int) - Method in class org.biomage.BioMaterial.LabeledExtract
Method to remove by position from Labels_list
removeElementAtFromQualityControlStatistics(int) - Method in class org.biomage.BioMaterial.BioMaterial
Method to remove by position from QualityControlStatistics_list
removeElementAtFromSourceBioMaterialMeasurements(int) - Method in class org.biomage.BioMaterial.Treatment
Method to remove by position from SourceBioMaterialMeasurements_list
removeElementAtFromTreatments(int) - Method in class org.biomage.BioMaterial.BioMaterial
Method to remove by position from Treatments_list
removeFromBioMaterial_list(BioMaterial) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove first BioMaterial from BioMaterial_list
removeFromBioSample_list(BioSample) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove first BioSample from BioSample_list
removeFromBioSource_list(BioSource) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove first BioSource from BioSource_list
removeFromCharacteristics(OntologyEntry) - Method in class org.biomage.BioMaterial.BioMaterial
Method to remove first OntologyEntry from Characteristics_list
removeFromComponentCompounds(CompoundMeasurement) - Method in class org.biomage.BioMaterial.Compound
Method to remove first CompoundMeasurement from ComponentCompounds_list
removeFromCompoundMeasurements(CompoundMeasurement) - Method in class org.biomage.BioMaterial.Treatment
Method to remove first CompoundMeasurement from CompoundMeasurements_list
removeFromCompound_list(Compound) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove first Compound from Compound_list
removeFromLabeledExtract_list(LabeledExtract) - Method in class org.biomage.BioMaterial.BioMaterial_package
Method to remove first LabeledExtract from LabeledExtract_list
removeFromLabels(Compound) - Method in class org.biomage.BioMaterial.LabeledExtract
Method to remove first Compound from Labels_list
removeFromQualityControlStatistics(NameValueType) - Method in class org.biomage.BioMaterial.BioMaterial
Method to remove first NameValueType from QualityControlStatistics_list
removeFromSourceBioMaterialMeasurements(BioMaterialMeasurement) - Method in class org.biomage.BioMaterial.Treatment
Method to remove first BioMaterialMeasurement from SourceBioMaterialMeasurements_list
removeFromTreatments(Treatment) - Method in class org.biomage.BioMaterial.BioMaterial
Method to remove first Treatment from Treatments_list

S

setAction(OntologyEntry) - Method in class org.biomage.BioMaterial.Treatment
Set method for action
setActionMeasurement(Measurement) - Method in class org.biomage.BioMaterial.Treatment
Set method for actionMeasurement
setBioMaterial(BioMaterial) - Method in class org.biomage.BioMaterial.BioMaterialMeasurement
Set method for bioMaterial
setBioMaterial_list(BioMaterial_package.BioMaterial_list) - Method in class org.biomage.BioMaterial.BioMaterial_package
Set method for bioMaterial_list
setBioSample_list(BioMaterial_package.BioSample_list) - Method in class org.biomage.BioMaterial.BioMaterial_package
Set method for bioSample_list
setBioSource_list(BioMaterial_package.BioSource_list) - Method in class org.biomage.BioMaterial.BioMaterial_package
Set method for bioSource_list
setCharacteristics(HasCharacteristics.Characteristics_list) - Method in class org.biomage.BioMaterial.BioMaterial
Set method for characteristics
setComponentCompounds(HasComponentCompounds.ComponentCompounds_list) - Method in class org.biomage.BioMaterial.Compound
Set method for componentCompounds
setCompound(Compound) - Method in class org.biomage.BioMaterial.CompoundMeasurement
Set method for compound
setCompoundMeasurements(HasCompoundMeasurements.CompoundMeasurements_list) - Method in class org.biomage.BioMaterial.Treatment
Set method for compoundMeasurements
setCompound_list(BioMaterial_package.Compound_list) - Method in class org.biomage.BioMaterial.BioMaterial_package
Set method for compound_list
setIsSolvent(boolean) - Method in class org.biomage.BioMaterial.Compound
Set method for isSolvent
setLabeledExtract_list(BioMaterial_package.LabeledExtract_list) - Method in class org.biomage.BioMaterial.BioMaterial_package
Set method for labeledExtract_list
setLabels(HasLabels.Labels_list) - Method in class org.biomage.BioMaterial.LabeledExtract
Set method for labels
setMaterialType(OntologyEntry) - Method in class org.biomage.BioMaterial.BioMaterial
Set method for materialType
setMeasurement(Measurement) - Method in class org.biomage.BioMaterial.BioMaterialMeasurement
Set method for measurement
setMeasurement(Measurement) - Method in class org.biomage.BioMaterial.CompoundMeasurement
Set method for measurement
setMerckIndex(OntologyEntry) - Method in class org.biomage.BioMaterial.Compound
Set method for merckIndex
setOrder(int) - Method in class org.biomage.BioMaterial.Treatment
Set method for order
setQualityControlStatistics(HasQualityControlStatistics.QualityControlStatistics_list) - Method in class org.biomage.BioMaterial.BioMaterial
Set method for qualityControlStatistics
setSourceBioMaterialMeasurements(HasSourceBioMaterialMeasurements.SourceBioMaterialMeasurements_list) - Method in class org.biomage.BioMaterial.Treatment
Set method for sourceBioMaterialMeasurements
setSourceContact(Contact) - Method in class org.biomage.BioMaterial.BioSource
Set method for sourceContact
setTreatments(HasTreatments.Treatments_list) - Method in class org.biomage.BioMaterial.BioMaterial
Set method for treatments
setType(OntologyEntry) - Method in class org.biomage.BioMaterial.BioSample
Set method for type
sourceBioMaterialMeasurements - Variable in class org.biomage.BioMaterial.Treatment
The BioMaterials and the amounts used in the treatment
sourceContact - Variable in class org.biomage.BioMaterial.BioSource
The BioSource's source is the provider of the biological material (a cell line, strain, etc...).

T

Treatment - class org.biomage.BioMaterial.Treatment.
The process by which a biomaterial is created (from source biomaterials).
Treatment() - Constructor for class org.biomage.BioMaterial.Treatment
Default constructor.
Treatment(Attributes) - Constructor for class org.biomage.BioMaterial.Treatment
Attribute constructor.
treatments - Variable in class org.biomage.BioMaterial.BioMaterial
This association is one way from BioMaterial to Treatment.
type - Variable in class org.biomage.BioMaterial.BioSample
The Type attribute describes the role the BioSample holds in the treatment hierarchy.

W

writeAssociations(Writer) - Method in class org.biomage.BioMaterial.BioMaterial
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.BioMaterialMeasurement
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.BioMaterial_package
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.BioSample
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.BioSource
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.Compound
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.CompoundMeasurement
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.LabeledExtract
writeAssociations
writeAssociations(Writer) - Method in class org.biomage.BioMaterial.Treatment
writeAssociations
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.BioMaterial
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.BioMaterialMeasurement
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.BioMaterial_package
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.BioSample
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.BioSource
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.Compound
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.CompoundMeasurement
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.LabeledExtract
writeAttributes
writeAttributes(Writer) - Method in class org.biomage.BioMaterial.Treatment
writeAttributes
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.BioMaterial
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.BioMaterialMeasurement
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.BioMaterial_package
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.BioSample
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.BioSource
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.Compound
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.CompoundMeasurement
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.LabeledExtract
writeMAGEML
writeMAGEML(Writer) - Method in class org.biomage.BioMaterial.Treatment
writeMAGEML

A B C G I L M O Q R S T W