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A
- AbstractScuflAction - class org.embl.ebi.escience.scufl.talisman.AbstractScuflAction.
- The superclass of all actions that operate on ScuflModel instances contained within ScuflModelBean objects in Talisman fields.
- AbstractScuflAction() - Constructor for class org.embl.ebi.escience.scufl.talisman.AbstractScuflAction
- AddDataConstraint - class org.embl.ebi.escience.scufl.talisman.AddDataConstraint.
- Adds a new data constraint to the ScuflModel contained within the field named by 'model' in the Talisman page.
- AddDataConstraint() - Constructor for class org.embl.ebi.escience.scufl.talisman.AddDataConstraint
- AddProcessor - class org.embl.ebi.escience.scufl.talisman.AddProcessor.
- Adds a new Processor to a ScuflModel within a Talisman BeanField.
- AddProcessor() - Constructor for class org.embl.ebi.escience.scufl.talisman.AddProcessor
D
- DestroyProcessor - class org.embl.ebi.escience.scufl.talisman.DestroyProcessor.
- Remove a named processor from the ScuflModel held in a Talisman bean.
- DestroyProcessor() - Constructor for class org.embl.ebi.escience.scufl.talisman.DestroyProcessor
- dotView - Variable in class org.embl.ebi.escience.scufl.talisman.ScuflModelBean
G
- getDot() - Method in class org.embl.ebi.escience.scufl.talisman.ScuflModelBean
- Get the Dot description
- getModel() - Method in class org.embl.ebi.escience.scufl.talisman.ScuflModelBean
- Get the underlying model for this bean
- getXScufl() - Method in class org.embl.ebi.escience.scufl.talisman.ScuflModelBean
- Get the XML text
M
- model - Variable in class org.embl.ebi.escience.scufl.talisman.AbstractScuflAction
- model - Variable in class org.embl.ebi.escience.scufl.talisman.ScuflModelBean
O
- org.embl.ebi.escience.scufl.talisman - package org.embl.ebi.escience.scufl.talisman
- Provides the object model for the Simple Conceptual Unified Flow Language (Scufl).
P
- PopulatePortList - class org.embl.ebi.escience.scufl.talisman.PopulatePortList.
- Populates a named SelectionList with names of ports within a given processor in the model.
- PopulatePortList() - Constructor for class org.embl.ebi.escience.scufl.talisman.PopulatePortList
- PopulateProcessorList - class org.embl.ebi.escience.scufl.talisman.PopulateProcessorList.
- Populates a named SelectionList with names of processors in the ScuflModel contained by the named bean field.
- PopulateProcessorList() - Constructor for class org.embl.ebi.escience.scufl.talisman.PopulateProcessorList
- PopulateServiceList - class org.embl.ebi.escience.scufl.talisman.PopulateServiceList.
- Talisman action to populate a SelectionList with the service list returned by the Soaplab analysis factory.
- PopulateServiceList() - Constructor for class org.embl.ebi.escience.scufl.talisman.PopulateServiceList
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.AbstractScuflAction
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.AddDataConstraint
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.AddProcessor
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.DestroyProcessor
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.PopulatePortList
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.PopulateProcessorList
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.PopulateServiceList
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.Scufl2XScufl
- process(HttpServletRequest, HttpServletResponse, Action) - Method in class org.embl.ebi.escience.scufl.talisman.XScufl2Dot
S
- Scufl2XScufl - class org.embl.ebi.escience.scufl.talisman.Scufl2XScufl.
- Provides a Talisman action plugin that parses a Scufl definition found in a named 'input' field and writes the XScufl version of it out to a second 'output' field.
- Scufl2XScufl() - Constructor for class org.embl.ebi.escience.scufl.talisman.Scufl2XScufl
- ScuflModelBean - class org.embl.ebi.escience.scufl.talisman.ScuflModelBean.
- This bean allows you to load a ScuflModel with attached XScuflView and DotView representations into a Talisman bean field.
- ScuflModelBean() - Constructor for class org.embl.ebi.escience.scufl.talisman.ScuflModelBean
- Must have a default constructor to comply with the Talisman bean requirements.
X
- XScufl2Dot - class org.embl.ebi.escience.scufl.talisman.XScufl2Dot.
- Provides a Talisman action plugin that parses an XScufl definition found in a named 'input' field and writes the dot format representation of it into the 'output' field.
- XScufl2Dot() - Constructor for class org.embl.ebi.escience.scufl.talisman.XScufl2Dot
- xscuflView - Variable in class org.embl.ebi.escience.scufl.talisman.ScuflModelBean
A D G M O P S X
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